More usefully, this is the other half of the reconciliation problem, alongside water content.
A supplier who reports both water and counter-ion has given you everything needed to reconcile the vial, and on this site that is a very short list.
Peptides purified by reverse-phase chromatography with a trifluoroacetic acid mobile phase are isolated as trifluoroacetate salts. The trifluoroacetate content depends on the number of basic residues and can run from a few per cent to well over ten by mass on a heavily basic sequence.
Net peptide content varies between lots as the process varies, so one figure does not characterise a supplier.
Purity says nothing about counter-ion. They are unrelated measurements.
edited 23 Feb 2026 by tare_weight — tightened the wording; no substantive change
7Does this hold for a longer chain length, where the deletion sequences accumulate? – seven_day_half 5 months ago add a comment